CDS

Accession Number TCMCG006C119452
gbkey CDS
Protein Id XP_013643920.1
Location complement(join(30609392..30609463,30609540..30609656,30609810..30609970,30610090..30610231,30610358..30610560,30610672..30610822,30610912..30611083,30611261..30611449,30611549..30611647,30611833..30611955,30612064..30612189,30612346..30612434,30612511..30612568,30612654..30612880,30613354..30613452,30613554..30613721,30613813..30613905,30614286..30614444,30614890..30614922,30614981..30615073,30615171..30615202,30615349..30615464,30615543..30615612,30615749..30616104,30616221..30616300))
Gene LOC106348676
GeneID 106348676
Organism Brassica napus

Protein

Length 1075aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013788466.2
Definition nuclear pore complex protein NUP107-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category UY
Description Nuclear pore protein 84 / 107
KEGG_TC 1.I.1
KEGG_Module M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K14301        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0000972        [VIEW IN EMBL-EBI]
GO:0000973        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005643        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006406        [VIEW IN EMBL-EBI]
GO:0006606        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0006997        [VIEW IN EMBL-EBI]
GO:0006999        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0017038        [VIEW IN EMBL-EBI]
GO:0017056        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0031080        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0031965        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034399        [VIEW IN EMBL-EBI]
GO:0034504        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0046931        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051028        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051170        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051292        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071427        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAATGGATATGGACACCTCTCCCAGCTACTTCGACCCCGAGGTCCTCAGCGTCAGAGATCAATTCCGTCGCTACCGGAAGAGACACTCTACATCGCCGCCGCATGAGGAAGTCTCGAGTCCGAATGTTAGTGAGAATAGGTTGCTGTACGATGGGGATTACATCCATAGTCCGACGAACACTGCCTTGCTTCTTGAGAACATTAAAGAAGAGGTTGATAGCTTTCACACCGGTCTTTACGAAGCTGAAGCGGTCTCTGCTGTTTCCAGGAGGGAGAGTGGTGGAGATGTGGATGGTGACGACGATGAGGGTATGTTTCGGAGAGTAGAGAGTCAGTCGCTGAAGGCTTGCAAGGTTGAGAATGATGAGTTGGCGGAGAGTGGGGATACGACCTTTGCTCTGTTTGCTTCTTTATTTGATTCTGCTCTTCAAGGACTGATGCCAATTCCTGATCTAATATTGAGACTTGAGGATTCATGCAGGGATGTTTCACAGTCGATTAGGTATGGATCAGATATAAGACATCGGGTTGTGGAGGATAAACTTATGAGACAGAAGGCTCAGCTTTTGCTTGGCGAGGCTGCCTCCTGGTCGCTTTTATGGAACCTATATGGAAAAGCTACGGAAGAAGTTCCGCAGGAATTGATTACGTCCCCATCAACATCTCATTTGGAGGCTTGTCAGTTTGTTGTAAACGACCATACAGCTCAGCTATGCCTTCGGATTGTCCTGTGGCTGGAAGATCTAGCTTCAAAATCACTTGATTTGGAAAGAAAGGTGCGGGGATCTCATGTGGGTACTTATCTTCCTAACGCTGGAGTGTGGCATCATACACAAAGATACCTCAAGAAAGCTGGCTCTGCCGCTGACACTGTACGCCATTTGGATTTTGATGCCCCAACTCGTGAACATGCTCGTCTTCTTCCTGATGACAAAAAACAAGATGAATCTCTTCTTGAGGATGTTTGGATTTTGTTAAGGGCTGGAAGAATAGAGGAGGCATGTGATCTCTGCAGGTCCGCTGGGCAGCCATGGAGAGCTGCAACTCTATGCCCTTTTTCTGGAATGGACATGTTTCCGTCTGTTGACGCACTGGTAAAGAATGGGAAAAATAGGACTCTCCAGGCTATTGAACTGGAAAGTGGCTTTGGCAATCAACTGCGTCTTTGGAAATGGGCTTCGTACTGTGCATCAGAGAAAATTGCAGAGCAGGATGGCGGCAAACATGAAGTTGCTGTTTTTGCAAACCAGTGCAGCAACCTGAACCGCATCTTGCCAATTTGTACTGATTGGGAGTCAGCTTGCTGGGCGATGGCAAAATCATGGCTTGATGTTCAAGTTGATCTAGAGCTCGCCCAATCGAAGCCAGGCTTGACAGAAAAGTTTAGAAGTTGTCTTGATGAAAGCCCTGAAACTATGCAAAATGGTCGTCTGGCTTCACTTGGGCCAGAAGATTGGCCGCTCCACGTTCTAAACCAGCAACCCCGTGACCTTCCTGCTCTTCTTCAGAAACTCCATTCAGGGGAAATGGTACACGATGCTGTTGTCAGGGGATGCAAAGAGCAGCACCGGCAAATTCAGATGACCCTTATGTCGGGGAATATCTCGCATCTTCTTGATATAATATGGTCATGGATCGCGCCCTTAGAAGATGATCAAAGCAACTTTAGGCCCCATGGCGATCCTCATATGATAAAGTTCGGTGCTCACGTGGTGCTTGTTCTTAGGTATATGCTTGCCGATGAAATCAAGGACAGGGAGAAGCTCAGTAATGTTGGTGATCTTATTCTTCATATGTATTCGATGTTTCTATTTTCAAAACAACATGAAGAACTAGTAGGAATATATGCGTCTCAGCTTGCTCGTCATCGCTGCATCGAACTTTTTGTACACATGATGGAGCTAAGGATGCATAGCAGCGTACATGTGAAGTTCAAAATCTTCCTTTCCGCTATGGAATACTTGCCATTCTCTCACGTGGATGACTCACAAGGAAATTTTGAGGAAATAGTTGACAGGGTTTTGTCAAGATCCCGGGAAATCAAACTTGCAAAATATGATCCCTCCGTTGATGTTGCAGAGCAGCATCGTCAACAGAGTCTTCAAAAAGCCATAGCCATTCAGTGGCTCTGTTTTACACCTCCATCTACTATAAAGGATGTCAAGGATGTTACTTCCAAATTGCTCCTGCGATCTTTGATGCACAGCAACATACTTTTCCGAGAGTTTGCTTTGATCGCCATGTGGAGGGTGCCTGCAACTCCGGTGGGTGCACACACGCTTCTTAGTTTTCTTGCTGAACCTCTGAAGCAACTCTCAGAGAATCCAGATACACTCGAGGATTATGTTTCCGAGAATTTGCAGGAGTTCCAAGACTGGAATGAGTATTATTCCTGTGACGCAAAATATCGCAACTGGCTCAAATTCCAATTAGAGAATGCTGAAGTCACTGAACTGTCAGAAGAGGAAAATCAAAAAGCTGTAGGAGCAGCCAAAGAGACTTTGGATTCTTCTTTGTCACTGCTCCTCAGAAAAGACAATCCTTGGTTGACATTTCTCGAAGACGATGTATTCGAATCAGAAGAAAATATGTTCCTTGAGTTGCATGCAACTGCGATGCTCTGTTTGCCTTCTGGTGAATGTTTGCGCCCAGATGCCACTGTTTGTGCGGCATTGATGAGTGCGCTTTACGCTTCTGTCACAGAGGAAGTTGTTTTAGACCGTCAGTTAATGGTAAATGTATCGATTTCATCAAGGGACAGCTACTGCATCGAGGTTGTGCTTCGGTGTTTAGCAACTGAGGGTGATGGACTTGGGCCACATAATGCAAATGACGGGGGTATTTTAAGTTCAGTTGCGGCAGCTGCTTTTAAAGGTGAGCTTACCCGGTTCCAGGCAGGTGTTACAATGGATATATCCCGCCTAGACGCTTGGTATTCAAGCAAAGAAGGCTCGCTTGAAACACCTGCAACTTATATTGTCCGCGGTCTCTGTAGGAGATGCTGTCTCCCAGAGCTAGTTCTTCGATCTATGCAGGTATCTGTTTGTCTAATGGAGTCAGGAAATCCACCTGAAGATCACGATGAGCTGATTGAGCTCGTGGCTTCTGATGAAACTGGTTTTATCTCTTTATTCAGCCAGCAACAATTACAGGAGTTTATGTTGTTTGAGAGAGAGTATCGTCTGTCCCAGTTGGAGCTCCAGGAGGAACTTTCATCATCTTGA
Protein:  
MEMDMDTSPSYFDPEVLSVRDQFRRYRKRHSTSPPHEEVSSPNVSENRLLYDGDYIHSPTNTALLLENIKEEVDSFHTGLYEAEAVSAVSRRESGGDVDGDDDEGMFRRVESQSLKACKVENDELAESGDTTFALFASLFDSALQGLMPIPDLILRLEDSCRDVSQSIRYGSDIRHRVVEDKLMRQKAQLLLGEAASWSLLWNLYGKATEEVPQELITSPSTSHLEACQFVVNDHTAQLCLRIVLWLEDLASKSLDLERKVRGSHVGTYLPNAGVWHHTQRYLKKAGSAADTVRHLDFDAPTREHARLLPDDKKQDESLLEDVWILLRAGRIEEACDLCRSAGQPWRAATLCPFSGMDMFPSVDALVKNGKNRTLQAIELESGFGNQLRLWKWASYCASEKIAEQDGGKHEVAVFANQCSNLNRILPICTDWESACWAMAKSWLDVQVDLELAQSKPGLTEKFRSCLDESPETMQNGRLASLGPEDWPLHVLNQQPRDLPALLQKLHSGEMVHDAVVRGCKEQHRQIQMTLMSGNISHLLDIIWSWIAPLEDDQSNFRPHGDPHMIKFGAHVVLVLRYMLADEIKDREKLSNVGDLILHMYSMFLFSKQHEELVGIYASQLARHRCIELFVHMMELRMHSSVHVKFKIFLSAMEYLPFSHVDDSQGNFEEIVDRVLSRSREIKLAKYDPSVDVAEQHRQQSLQKAIAIQWLCFTPPSTIKDVKDVTSKLLLRSLMHSNILFREFALIAMWRVPATPVGAHTLLSFLAEPLKQLSENPDTLEDYVSENLQEFQDWNEYYSCDAKYRNWLKFQLENAEVTELSEEENQKAVGAAKETLDSSLSLLLRKDNPWLTFLEDDVFESEENMFLELHATAMLCLPSGECLRPDATVCAALMSALYASVTEEVVLDRQLMVNVSISSRDSYCIEVVLRCLATEGDGLGPHNANDGGILSSVAAAAFKGELTRFQAGVTMDISRLDAWYSSKEGSLETPATYIVRGLCRRCCLPELVLRSMQVSVCLMESGNPPEDHDELIELVASDETGFISLFSQQQLQEFMLFEREYRLSQLELQEELSSS